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Psed_0732 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0732" - LytTr DNA-binding protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0732LytTr DNA-binding protein (463 aa)    
Predicted Functional Partners:
Psed_0735
PQQ-dependent dehydrogenase (562 aa)
 
          0.792
Psed_0739
Coenzyme PQQ biosynthesis protein PqqD (92 aa)
 
          0.743
Psed_5958
Agarase (371 aa)
   
          0.663
Psed_2973
Dihydroxyacetone kinase subunit DhaL (209 aa)
   
      0.662
Psed_2972
Dihydroxyacetone kinase subunit DhaK (333 aa)
   
      0.662
Psed_2330
Hypothetical protein (295 aa)
   
          0.640
pqqB
Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm (297 aa)
 
          0.636
Psed_3048
AmiS/UreI transporter (212 aa)
 
          0.629
Psed_0904
NAD-dependent epimerase/dehydratase (147 aa)
   
          0.605
pqqE
Coenzyme PQQ biosynthesis protein E (361 aa)
 
          0.583
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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