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Psed_0793 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0793" - Short-chain dehydrogenase/reductase SDR in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0793Short-chain dehydrogenase/reductase SDR (288 aa)    
Predicted Functional Partners:
Psed_0792
LysR family transcriptional regulator (301 aa)
 
          0.759
Psed_2474
TetR family transcriptional regulator (218 aa)
   
          0.532
Psed_2736
Hypothetical protein (226 aa)
   
          0.466
Psed_5251
Hypothetical protein (217 aa)
   
          0.463
Psed_6573
Monooxygenase FAD-binding protein (359 aa)
   
          0.443
Psed_2172
Haloacid dehalogenase (208 aa)
   
          0.430
Psed_2148
Haloacid dehalogenase (243 aa)
   
          0.415
Psed_1828
Monooxygenase FAD-binding protein (435 aa)
   
          0.404
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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