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rsmI protein (Pseudonocardia dioxanivorans) - STRING interaction network
"rsmI" - Ribosomal RNA small subunit methyltransferase I in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rsmIRibosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (282 aa)    
Predicted Functional Partners:
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (140 aa)
 
   
  0.755
Psed_0826
Glycosyl transferase protein (527 aa)
   
        0.742
Psed_2826
RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (312 aa)
 
 
  0.702
Psed_3807
Pseudouridine synthase (252 aa)
 
   
  0.672
der
GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis (486 aa)
 
   
  0.656
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (261 aa)
 
   
  0.628
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (284 aa)
   
   
  0.626
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (263 aa)
 
 
  0.625
Psed_0348
DNA polymerase III subunits gamma and tau (829 aa)
 
        0.624
Psed_5369
Alanine racemase; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (419 aa)
 
      0.617
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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