STRINGSTRING
Psed_0832 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0832" - LuxR family transcriptional regulator in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0832LuxR family transcriptional regulator (239 aa)    
Predicted Functional Partners:
Psed_0831
O-methyltransferase 2 (329 aa)
 
          0.697
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (597 aa)
 
          0.687
Psed_0992
Hypothetical protein (346 aa)
   
          0.642
Psed_3661
Hypothetical protein (104 aa)
   
          0.637
Psed_5388
DNA translocase FtsK (1301 aa)
   
          0.632
Psed_0830
Chorismate mutase (201 aa)
              0.607
Psed_3660
Helix-turn-helix domain-containing protein (296 aa)
   
          0.604
Psed_1931
AraC family transcriptional regulator (254 aa)
   
          0.594
Psed_0357
Helix-turn-helix domain-containing protein (298 aa)
   
          0.588
Psed_4552
TetR family transcriptional regulator (186 aa)
   
          0.583
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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