STRINGSTRING
Psed_0837 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0837" - PadR family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0837PadR family transcriptional regulator (186 aa)    
Predicted Functional Partners:
Psed_0838
EmrB/QacA subfamily drug resistance transporter (508 aa)
 
          0.898
Psed_0840
ABC transporter (596 aa)
              0.640
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (323 aa)
              0.640
Psed_0282
Esterase (427 aa)
   
          0.535
Psed_0336
NUDIX hydrolase (150 aa)
   
          0.502
Psed_5987
Hypothetical protein (157 aa)
   
          0.463
Psed_1934
Hypothetical protein (375 aa)
   
          0.450
Psed_0841
Hypothetical protein (121 aa)
              0.435
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (284 aa)
              0.429
Psed_2975
NADPH-dependent FMN reductase (181 aa)
   
          0.417
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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