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Psed_0848 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0848" - Long-chain fatty acid--ACP ligase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0848Long-chain fatty acid--ACP ligase (556 aa)    
Predicted Functional Partners:
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
   
 
  0.789
Psed_5037
o-succinylbenzoate--CoA ligase (553 aa)
     
  0.722
Psed_2540
o-succinylbenzoate--CoA ligase (513 aa)
     
  0.709
Psed_5600
o-succinylbenzoate--CoA ligase (387 aa)
 
        0.700
Psed_3053
Hypothetical protein (219 aa)
   
          0.700
Psed_1779
o-succinylbenzoate--CoA ligase (515 aa)
     
  0.690
Psed_0542
o-succinylbenzoate--CoA ligase (499 aa)
     
  0.690
Psed_0966
Hypothetical protein (217 aa)
   
          0.690
Psed_2249
NADPH-quinone reductase (313 aa)
       
  0.686
Psed_0847
beta-Ala-His dipeptidase (450 aa)
   
   
  0.674
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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