STRINGSTRING
Psed_0897 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0897" - Septum formation initiator in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0897Septum formation initiator (171 aa)    
Predicted Functional Partners:
Psed_0898
Hypothetical protein (176 aa)
            0.958
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (430 aa)
              0.881
Psed_2808
Polypeptide-transport-associated domain-containing protein (460 aa)
       
 
  0.785
Psed_0116
Peptidoglycan glycosyltransferase (489 aa)
   
 
 
  0.681
Psed_0895
Hypothetical protein (145 aa)
 
          0.643
Psed_4870
Penicillin-binding protein transpeptidase (970 aa)
       
 
  0.629
Psed_4707
Penicillin-binding protein transpeptidase (621 aa)
       
 
  0.629
Psed_2800
Penicillin-binding protein transpeptidase (928 aa)
       
 
  0.629
Psed_3358
Hypothetical protein (265 aa)
   
          0.605
Psed_4835
Peptidase M48 Ste24p (303 aa)
   
          0.600
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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