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Psed_0933 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0933" - Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0933Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (151 aa)    
Predicted Functional Partners:
Psed_0932
acetyl-CoA acetyltransferase (409 aa)
              0.621
Psed_4438
Patatin (278 aa)
   
          0.600
Psed_4811
N-6 DNA methylase (585 aa)
   
          0.588
Psed_0934
Hypothetical protein (119 aa)
              0.508
Psed_5728
Hypothetical protein (196 aa)
   
          0.501
Psed_0569
TetR family transcriptional regulator (206 aa)
   
          0.501
Psed_1916
Carnitine O-acetyltransferase (588 aa)
   
          0.493
Psed_5218
Ribonuclease BN (291 aa)
   
          0.484
Psed_0935
ECF subfamily RNA polymerase sigma-24 subunit (435 aa)
              0.476
Psed_4038
Hypothetical protein (521 aa)
   
          0.475
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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