STRINGSTRING
Psed_0972 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0972" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0972Hypothetical protein (423 aa)    
Predicted Functional Partners:
Psed_3387
Transcriptional regulator (69 aa)
   
          0.621
Psed_2610
FAD dependent oxidoreductase (465 aa)
   
          0.609
Psed_4522
Hypothetical protein (197 aa)
   
          0.539
Psed_3412
Hypothetical protein (129 aa)
   
          0.484
Psed_2611
ATPase AAA (743 aa)
   
          0.483
Psed_5016
Polyketide cyclase/dehydrase (188 aa)
   
          0.466
Psed_2029
Hypothetical protein (300 aa)
   
          0.464
Psed_5543
Hypothetical protein (118 aa)
   
          0.462
Psed_5536
Hypothetical protein (286 aa)
   
          0.460
Psed_6199
Molecular chaperone DnaJ (405 aa)
   
          0.448
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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