STRINGSTRING
Psed_0975 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0975" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0975Hypothetical protein (176 aa)    
Predicted Functional Partners:
Psed_0974
Nitroreductase (238 aa)
 
          0.878
Psed_0973
Hydrolase CocE/NonD family protein (557 aa)
              0.787
Psed_1490
benzoyl-CoA-dihydrodiol lyase (585 aa)
   
          0.757
Psed_1489
benzoyl-CoA oxygenase subunit B (470 aa)
   
          0.753
Psed_3625
Alpha/beta hydrolase (261 aa)
   
          0.641
Psed_0976
TetR family transcriptional regulator (209 aa)
              0.636
Psed_3730
Carboxymuconolactone decarboxylase (186 aa)
   
          0.485
Psed_0266
Hypothetical protein (96 aa)
   
          0.429
Psed_4244
Alpha/beta hydrolase (241 aa)
   
          0.424
Psed_6421
Glyoxalase/bleomycin resistance protein/dioxygenase (151 aa)
   
          0.413
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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