STRINGSTRING
Psed_0989 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_0989" - Transcriptional coactivator/pterin dehydratase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_0989Transcriptional coactivator/pterin dehydratase (98 aa)    
Predicted Functional Partners:
Psed_0991
ABC transporter (326 aa)
   
        0.770
Psed_0992
Hypothetical protein (346 aa)
              0.767
Psed_0990
ABC transporter integral membrane protein (283 aa)
              0.767
Psed_0993
Transposase IS4 family protein (294 aa)
              0.548
Psed_0996
NUDIX hydrolase (287 aa)
   
        0.486
Psed_0995
Histidine kinase (439 aa)
   
        0.466
Psed_0325
Glyoxalase/bleomycin resistance protein/dioxygenase (206 aa)
 
   
  0.424
Psed_5162
GTPase EngC; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (333 aa)
              0.412
orn
Oligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (204 aa)
              0.412
Psed_0994
Winged helix family two component transcriptional regulator (228 aa)
              0.408
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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