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Psed_1028 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1028" - ECF subfamily RNA polymerase sigma-24 subunit in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1028ECF subfamily RNA polymerase sigma-24 subunit (221 aa)    
Predicted Functional Partners:
Psed_1029
Hypothetical protein (236 aa)
   
   
  0.901
Psed_0291
ECF subfamily RNA polymerase sigma-24 subunit (203 aa)
   
          0.776
Psed_1030
Peptidase S1 and S6 chymotrypsin/Hap (591 aa)
   
   
  0.715
Psed_1027
Type 11 methyltransferase (184 aa)
              0.667
Psed_6524
ECF subfamily RNA polymerase sigma-24 subunit (244 aa)
   
          0.654
tatB
Sec-independent protein translocase tatB-like protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation (143 aa)
              0.609
Psed_1727
ECF subfamily RNA polymerase sigma-24 subunit (226 aa)
   
          0.586
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1300 aa)
     
 
  0.582
sigA
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (461 aa)
   
 
  0.578
Psed_2978
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (348 aa)
   
 
  0.578
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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