STRINGSTRING
Psed_1035 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1035" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1035Hypothetical protein (186 aa)    
Predicted Functional Partners:
Psed_1036
Asp/Glu/hydantoin racemase (255 aa)
 
          0.960
Psed_1037
Asp/Glu/hydantoin racemase (244 aa)
 
          0.935
Psed_1034
Glyoxylate reductase (314 aa)
 
          0.901
Psed_1033
Amidase (462 aa)
 
          0.899
Psed_1038
GntR family transcriptional regulator (238 aa)
 
          0.805
Psed_1040
Acetylornithine transaminase (418 aa)
 
          0.691
Psed_2368
Iron sulfur domain-containing protein (74 aa)
   
          0.572
Psed_3284
Hypothetical protein (683 aa)
   
          0.504
Psed_4921
Sarcosine oxidase subunit gamma (232 aa)
   
          0.501
Psed_1141
Bifunctional deaminase-reductase domain-containing protein (211 aa)
   
          0.498
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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