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Psed_1037 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1037" - Asp/Glu/hydantoin racemase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1037Asp/Glu/hydantoin racemase (244 aa)    
Predicted Functional Partners:
Psed_1035
Hypothetical protein (186 aa)
 
          0.935
Psed_1038
GntR family transcriptional regulator (238 aa)
 
          0.871
Psed_1034
Glyoxylate reductase (314 aa)
 
          0.862
Psed_1036
Asp/Glu/hydantoin racemase (255 aa)
 
       
0.842
Psed_1033
Amidase (462 aa)
 
          0.805
Psed_1040
Acetylornithine transaminase (418 aa)
 
          0.641
Psed_3885
Hypothetical protein (820 aa)
   
          0.586
Psed_6340
Asp/Glu/hydantoin racemase; Catalyzes the conversion of maleate to fumarate (240 aa)
 
          0.551
Psed_1039
Auxin efflux carrier family protein (344 aa)
              0.526
Psed_4251
Asp/Glu/hydantoin racemase; Catalyzes the conversion of maleate to fumarate (265 aa)
 
          0.493
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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