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Psed_1050 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1050" - ABC transporter permease in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1050ABC transporter permease (319 aa)    
Predicted Functional Partners:
Psed_1052
Glycerol-3-phosphate-transporting ATPase (399 aa)
 
  0.998
Psed_1051
ABC transporter permease (278 aa)
 
  0.991
Psed_1049
ABC transporter substrate-binding protein (456 aa)
 
   
  0.982
Psed_3206
Polyamine-transporting ATPase (380 aa)
 
   
  0.784
Psed_6642
Fe(3+)-transporting ATPase (356 aa)
 
   
  0.683
Psed_4802
Alpha amylase (519 aa)
 
     
  0.638
Psed_3666
DeoR family transcriptional regulator (264 aa)
 
     
  0.622
Psed_1048
Hypothetical protein (178 aa)
 
        0.618
Psed_1729
Trehalose synthase (587 aa)
 
     
  0.588
Psed_2912
ABC transporter permease (347 aa)
     
  0.553
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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