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Psed_1054 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1054" - 1-aminocyclopropane-1-carboxylate deaminase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_10541-aminocyclopropane-1-carboxylate deaminase (336 aa)    
Predicted Functional Partners:
Psed_1053
GntR family transcriptional regulator (222 aa)
 
          0.926
Psed_1055
Integrase catalytic subunit (436 aa)
              0.606
Psed_1052
Glycerol-3-phosphate-transporting ATPase (399 aa)
              0.453
Psed_1051
ABC transporter permease (278 aa)
              0.452
Psed_1050
ABC transporter permease (319 aa)
              0.435
Psed_1049
ABC transporter substrate-binding protein (456 aa)
              0.435
Psed_6523
Fructose-bisphosphate aldolase (343 aa)
              0.412
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (443 aa)
              0.412
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (441 aa)
              0.412
Psed_1845
Glutamate-1-semialdehyde 2,1-aminomutase (448 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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