STRINGSTRING
Psed_1059 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1059" - Rieske in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1059Rieske (2Fe-2S) domain-containing protein (330 aa)    
Predicted Functional Partners:
Psed_3342
Amine oxidase (509 aa)
     
  0.964
Psed_1058
Type 11 methyltransferase (264 aa)
 
     
  0.842
Psed_2783
Phytoene desaturase (532 aa)
 
     
  0.827
Psed_1060
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions (367 aa)
              0.801
Psed_2781
Phytoene synthase (336 aa)
 
     
  0.780
Psed_5297
Hypothetical protein (358 aa)
   
          0.511
Psed_2474
TetR family transcriptional regulator (218 aa)
   
          0.498
Psed_1737
Signal transduction histidine kinase (379 aa)
   
          0.480
Psed_4665
Hypothetical protein (233 aa)
   
          0.472
Psed_5452
Ribonucleotide-diphosphate reductase subunit beta (324 aa)
   
          0.462
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]