STRINGSTRING
Psed_1079 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1079" - TetR family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1079TetR family transcriptional regulator (205 aa)    
Predicted Functional Partners:
Psed_1083
UBA/THIF-type NAD/FAD binding protein (390 aa)
              0.687
Psed_1081
Hypothetical protein (326 aa)
              0.617
Psed_1080
Heavy metal translocating P-type ATPase (775 aa)
              0.617
Psed_1082
Alpha/beta hydrolase (364 aa)
              0.568
Psed_1597
TetR family transcriptional regulator (208 aa)
   
          0.546
pafA
Proteasome accessory factor PafA; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine (453 aa)
   
        0.536
Psed_3306
Proteasome accessory factor PafA2 (499 aa)
   
          0.513
Psed_3324
phosphoribosyl-ATP diphosphatase (87 aa)
   
          0.455
Psed_1014
Succinyl-diaminopimelate desuccinylase (375 aa)
   
        0.433
Psed_3227
TetR family transcriptional regulator (207 aa)
   
          0.419
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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