STRINGSTRING
Psed_1088 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1088" - Nitrate reductase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1088Nitrate reductase (686 aa)    
Predicted Functional Partners:
Psed_1090
Nitrite reductase (NAD(P)H) large subunit (845 aa)
 
  0.997
Psed_1091
Nitrite reductase (NAD(P)H) small subunit (127 aa)
 
 
  0.996
Psed_1089
Nitrite reductase (NAD(P)H) (517 aa)
 
  0.994
Psed_1087
Nitrite transporter (460 aa)
 
 
  0.987
Psed_1092
Uroporphyrinogen III synthase HEM4 (396 aa)
 
     
  0.967
Psed_4299
Major facilitator superfamily protein (408 aa)
 
 
  0.966
Psed_4301
Nitrate reductase subunit beta (580 aa)
   
  0.946
Psed_2521
Rieske (2Fe-2S) domain-containing protein (138 aa)
       
  0.945
Psed_2417
4Fe-4S ferredoxin (286 aa)
   
  0.937
Psed_5875
2-nitropropane dioxygenase (349 aa)
       
    0.900
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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