STRINGSTRING
Psed_1130 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1130" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1130Hypothetical protein (53 aa)    
Predicted Functional Partners:
Psed_1131
Hypothetical protein (67 aa)
              0.859
Psed_1129
Hypothetical protein (107 aa)
              0.859
Psed_1128
Hypothetical protein (320 aa)
              0.859
Psed_1127
DNA translocase FtsK (749 aa)
              0.859
Psed_1133
Kinase (184 aa)
              0.566
Psed_1132
GntR family transcriptional regulator (285 aa)
              0.566
Psed_1126
Bifunctional DNA primase/polymerase (315 aa)
              0.496
Psed_1125
Hypothetical protein (378 aa)
              0.496
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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