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Psed_1163 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1163" - Regulatory protein ArsR in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1163Regulatory protein ArsR (97 aa)    
Predicted Functional Partners:
Psed_1164
Glyoxalase/bleomycin resistance protein/dioxygenase (129 aa)
 
          0.965
Psed_3771
Activator of Hsp90 ATPase 1 family protein (147 aa)
 
          0.732
Psed_1162
Short-chain dehydrogenase/reductase SDR (240 aa)
              0.728
Psed_1161
LysR family transcriptional regulator (309 aa)
              0.565
Psed_3152
ATP-binding protein (179 aa)
   
          0.519
Psed_2349
ATP-binding protein (137 aa)
   
          0.509
Psed_2710
ATP-binding protein (156 aa)
   
          0.464
Psed_6321
Glyoxalase/bleomycin resistance protein/dioxygenase (142 aa)
 
          0.429
Psed_4961
Hypothetical protein (340 aa)
   
          0.427
Psed_5529
Transcription factor WhiB (94 aa)
   
          0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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