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Psed_1175 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1175" - Short-chain dehydrogenase/reductase SDR in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1175Short-chain dehydrogenase/reductase SDR (233 aa)    
Predicted Functional Partners:
Psed_1174
Queuosine biosynthesis protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (355 aa)
 
          0.970
Psed_1176
MerR family transcriptional regulator (156 aa)
              0.677
Psed_1484
3-oxoacyl-ACP reductase (258 aa)
   
          0.651
Psed_2605
3-oxoacyl-ACP reductase (264 aa)
   
          0.612
Psed_5096
Short-chain dehydrogenase/reductase SDR (269 aa)
   
          0.585
Psed_0219
3-oxoacyl-ACP reductase (244 aa)
   
          0.559
Psed_0540
3-oxoacyl-ACP reductase (265 aa)
   
          0.557
Psed_2455
3-oxoacyl-ACP reductase (256 aa)
   
          0.556
Psed_0520
3-oxoacyl-ACP reductase (277 aa)
   
          0.537
Psed_4998
Hypothetical protein (147 aa)
   
          0.535
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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