STRINGSTRING
Psed_1191 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1191" - Xanthine/uracil/vitamin C permease in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1191Xanthine/uracil/vitamin C permease (562 aa)    
Predicted Functional Partners:
Psed_1192
Isochorismatase hydrolase (228 aa)
 
          0.953
Psed_1193
Isochorismatase hydrolase (244 aa)
 
          0.935
Psed_1194
Allophanate hydrolase (461 aa)
              0.872
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (526 aa)
   
   
  0.752
Psed_1195
GntR family transcriptional regulator (229 aa)
 
          0.727
Psed_3186
Isochorismatase hydrolase (235 aa)
 
          0.562
Psed_1196
Hypothetical protein (240 aa)
         
  0.520
Psed_5383
Cytosine deaminase (427 aa)
 
        0.516
Psed_6529
S-adenosylhomocysteine deaminase (483 aa)
 
        0.496
Psed_6276
Hypothetical protein (469 aa)
 
          0.493
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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