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Psed_1246 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1246" - Ribulose-phosphate 3-epimerase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1246Ribulose-phosphate 3-epimerase (240 aa)    
Predicted Functional Partners:
Psed_6244
Transketolase (677 aa)
 
  0.991
Psed_3406
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (695 aa)
 
  0.990
Psed_3462
1-deoxy-D-xylulose-5-phosphate synthase (629 aa)
 
  0.983
Psed_1910
Ribose 5-phosphate isomerase (157 aa)
       
  0.947
Psed_1417
Phosphoribulokinase (292 aa)
       
  0.947
Psed_6243
Phosphoribulokinase/uridine kinase (315 aa)
   
 
  0.936
Psed_5086
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (478 aa)
   
  0.934
Psed_1253
Thymidylate kinase (569 aa)
 
          0.929
Psed_1103
Xylulokinase (468 aa)
     
  0.928
Psed_4839
Phosphoketolase (784 aa)
       
  0.914
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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