STRINGSTRING
Psed_1268 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1268" - Radical SAM domain-containing protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1268Radical SAM domain-containing protein (542 aa)    
Predicted Functional Partners:
Psed_1269
Type 11 methyltransferase (270 aa)
          0.991
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
         
    0.900
Psed_1270
Hypothetical protein (157 aa)
              0.638
Psed_2659
XshC-Cox1-family protein (305 aa)
 
          0.602
Psed_0111
Hypothetical protein (164 aa)
   
          0.588
Psed_4747
Abortive infection protein (391 aa)
   
          0.572
Psed_6595
GTP-binding protein HSR1-like protein (499 aa)
   
          0.543
Psed_5292
Haloalkane dehalogenase (309 aa)
   
          0.482
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (183 aa)
 
          0.479
Psed_3768
Hypothetical protein (770 aa)
   
          0.474
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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