STRINGSTRING
Psed_1369 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1369" - Luciferase-like protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1369Luciferase-like protein (433 aa)    
Predicted Functional Partners:
Psed_1368
SMP-30/Gluconolaconase/LRE-like region-containing protein (283 aa)
   
        0.843
Psed_4935
Luciferase oxidoreductase, group 1 (419 aa)
   
          0.755
Psed_1823
Luciferase oxidoreductase, group 1 (330 aa)
   
          0.744
Psed_4434
F420-dependent oxidoreductase (307 aa)
   
          0.737
Psed_3906
Luciferase-like protein (426 aa)
   
          0.733
Psed_5207
F420-0-gamma-glutamyl ligase (454 aa)
   
   
  0.702
Psed_1370
LacI family transcriptional regulator (343 aa)
              0.701
Psed_5839
NADPH-dependent FMN reductase (189 aa)
   
 
  0.667
Psed_1367
Luciferase-like protein (381 aa)
 
       
0.608
Psed_2479
Luciferase-like protein (299 aa)
   
          0.552
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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