STRINGSTRING
Psed_1420 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1420" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1420Hypothetical protein (215 aa)    
Predicted Functional Partners:
Psed_0812
Methane/phenol/toluene hydroxylase (350 aa)
   
          0.728
Psed_0815
Methane/phenol/toluene hydroxylase (510 aa)
   
          0.715
Psed_1436
Methane/phenol/toluene hydroxylase (508 aa)
   
          0.695
Psed_1439
Methane/phenol/toluene hydroxylase (335 aa)
   
          0.674
Psed_6058
Methane/phenol/toluene hydroxylase (340 aa)
   
          0.575
Psed_6062
Phenol 2-monooxygenase (505 aa)
   
          0.536
Psed_0631
Methane/phenol/toluene hydroxylase (395 aa)
   
          0.528
Psed_0632
Monooxygenase component MmoB/DmpM (125 aa)
   
          0.514
Psed_1422
Ferritin (146 aa)
              0.502
Psed_1421
Fur family ferric uptake regulator (141 aa)
              0.502
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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