STRINGSTRING
Psed_1424 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1424" - Major facilitator superfamily protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1424Major facilitator superfamily protein (415 aa)    
Predicted Functional Partners:
Psed_1423
TetR family transcriptional regulator (204 aa)
 
          0.947
Psed_1425
Hypothetical protein (89 aa)
              0.810
Psed_2485
TetR family transcriptional regulator (197 aa)
 
          0.639
Psed_3934
Major facilitator superfamily protein (405 aa)
   
          0.543
Psed_1850
Oxidoreductase domain-containing protein (735 aa)
 
   
  0.505
Psed_1421
Fur family ferric uptake regulator (141 aa)
   
   
  0.492
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.479
Psed_6597
Isoquinoline 1-oxidoreductase (753 aa)
     
      0.472
Psed_6473
Carbon-monoxide dehydrogenase (806 aa)
     
      0.472
Psed_6472
Xanthine dehydrogenase (773 aa)
     
      0.472
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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