STRINGSTRING
Psed_1430 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1430" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1430Hypothetical protein (277 aa)    
Predicted Functional Partners:
Psed_1429
Hypothetical protein (286 aa)
           
0.738
Psed_1431
Hypothetical protein (132 aa)
              0.721
Psed_4077
Hypothetical protein (393 aa)
 
          0.665
Psed_2736
Hypothetical protein (226 aa)
   
          0.645
Psed_0016
Integrase catalytic subunit (581 aa)
   
          0.589
Psed_3250
Integrase catalytic subunit (553 aa)
   
          0.573
Psed_2296
Hypothetical protein (155 aa)
   
          0.543
Psed_4496
Hypothetical protein (375 aa)
   
          0.537
Psed_1286
Hypothetical protein (321 aa)
 
        0.528
Psed_5305
F420-dependent oxidoreductase (320 aa)
   
          0.499
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (11%) [HD]