STRINGSTRING
Psed_1482 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1482" - Aminocarboxymuconate-semialdehyde decarboxylase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1482Aminocarboxymuconate-semialdehyde decarboxylase (332 aa)    
Predicted Functional Partners:
Psed_2510
Aldehyde dehydrogenase (508 aa)
   
 
  0.904
Psed_1483
Amidohydrolase (453 aa)
              0.863
Psed_4288
Amidohydrolase (327 aa)
   
          0.778
Psed_0237
NmrA family protein (302 aa)
 
          0.628
Psed_2478
Amidohydrolase (395 aa)
   
          0.604
Psed_1481
AraC family transcriptional regulator (336 aa)
              0.582
Psed_4292
4-oxalocrotonate decarboxylase (256 aa)
 
          0.551
Psed_2523
2-oxopent-4-enoate hydratase (252 aa)
 
          0.540
Psed_3214
NmrA family protein (293 aa)
 
          0.536
Psed_4293
2-oxopent-4-enoate hydratase (269 aa)
 
          0.526
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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