STRINGSTRING
Psed_1485 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1485" - Transcriptional regulator TrmB in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1485Transcriptional regulator TrmB (299 aa)    
Predicted Functional Partners:
Psed_1484
3-oxoacyl-ACP reductase (258 aa)
              0.668
Psed_5892
NADPH--hemoprotein reductase (1080 aa)
   
     
  0.638
Psed_0373
TetR family transcriptional regulator (219 aa)
   
          0.526
Psed_6538
ATPase AAA (804 aa)
 
          0.510
Psed_1457
Alpha/beta hydrolase (350 aa)
   
          0.482
Psed_1649
Pentapeptide repeat-containing protein (292 aa)
   
          0.439
Psed_2819
Type 12 methyltransferase (252 aa)
   
          0.433
Psed_0701
2,4-dichlorophenol 6-monooxygenase (518 aa)
   
          0.433
Psed_3346
Ornithine decarboxylase (374 aa)
              0.412
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (499 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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