STRINGSTRING
Psed_1493 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1493" - ATPase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1493ATPase (646 aa)    
Predicted Functional Partners:
Psed_2723
Magnesium chelatase (755 aa)
   
  0.934
Psed_3023
Cobaltochelatase subunit CobN (1201 aa)
   
 
  0.763
Psed_3374
ATPase (358 aa)
   
          0.757
Psed_3017
Precorrin-6y C5,15-methyltransferase subunit CbiE (405 aa)
   
        0.665
Psed_1492
Alcohol dehydrogenase (373 aa)
   
        0.664
Psed_2795
Transglutaminase domain-containing protein (832 aa)
   
          0.603
Psed_3020
precorrin-3B C17-methyltransferase (517 aa)
   
        0.593
Psed_1494
LmbE family protein (269 aa)
              0.527
Psed_2727
uroporphyrin-III C-methyltransferase (403 aa)
   
   
  0.475
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) (293 aa)
     
        0.475
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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