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Psed_1532 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1532" - Selenocysteine-specific translation elongation factor in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Psed_1532Selenocysteine-specific translation elongation factor (601 aa)    
Predicted Functional Partners:
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis (436 aa)
   
  0.993
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (344 aa)
 
   
  0.959
Psed_1531
Anti-anti-sigma factor (150 aa)
              0.859
Psed_2417
4Fe-4S ferredoxin (286 aa)
 
     
  0.851
Psed_2418
Formate dehydrogenase subunit alpha (1078 aa)
 
     
  0.813
Psed_2416
Polysulfide reductase NrfD (331 aa)
 
          0.777
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (271 aa)
       
    0.600
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (179 aa)
       
    0.600
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (101 aa)
     
    0.577
rpmC
50S ribosomal protein L29 (80 aa)
     
 
    0.528
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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