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Psed_1553 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1553" - acetyl-CoA acetyltransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1553acetyl-CoA acetyltransferase (395 aa)    
Predicted Functional Partners:
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
 
  0.999
Psed_1710
3-hydroxyacyl-CoA dehydrogenase (594 aa)
  0.998
Psed_6176
acyl-CoA oxidase (634 aa)
   
 
  0.974
Psed_4112
butyryl-CoA dehydrogenase (383 aa)
   
 
  0.974
Psed_4004
acyl-CoA dehydrogenase (600 aa)
   
 
  0.974
Psed_2575
butyryl-CoA dehydrogenase (375 aa)
   
 
  0.974
Psed_1576
butyryl-CoA dehydrogenase (388 aa)
   
 
  0.974
Psed_0551
glutaryl-CoA dehydrogenase (396 aa)
   
 
  0.974
Psed_6333
enoyl-CoA hydratase (299 aa)
   
  0.964
Psed_6217
enoyl-CoA hydratase (248 aa)
   
  0.964
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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