STRINGSTRING
Psed_1554 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1554" - Protein tyrosine/serine phosphatase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1554Protein tyrosine/serine phosphatase (247 aa)    
Predicted Functional Partners:
Psed_1553
acetyl-CoA acetyltransferase (395 aa)
              0.859
Psed_1552
Pyruvate, phosphate dikinase (591 aa)
              0.859
Psed_1551
Hypothetical protein (200 aa)
              0.805
Psed_1550
o-succinylbenzoate--CoA ligase (491 aa)
              0.805
Psed_1549
Hypothetical protein (516 aa)
              0.577
Psed_1548
Hypothetical protein (241 aa)
              0.577
Psed_1555
Peptidase S1 and S6 chymotrypsin/Hap (620 aa)
              0.467
Psed_1547
Pyruvate carboxylase (491 aa)
              0.450
Psed_1546
Biotin carboxylase (465 aa)
              0.450
Psed_1545
acetyl-CoA carboxylase, biotin carboxyl carrier protein (155 aa)
              0.450
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (11%) [HD]