STRINGSTRING
Psed_1573 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1573" - Biotin carboxylase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1573Biotin carboxylase (1873 aa)    
Predicted Functional Partners:
Psed_2963
acetyl-CoA carboxylase (494 aa)
   
 
  0.997
Psed_3033
Biotin/lipoyl attachment domain-containing protein (199 aa)
 
  0.968
Psed_1545
acetyl-CoA carboxylase, biotin carboxyl carrier protein (155 aa)
 
0.954
Psed_0502
Biotin/lipoyl attachment domain-containing protein (84 aa)
   
  0.954
Psed_5260
biotin-(acetyl-CoA carboxylase) ligase (279 aa)
   
  0.932
Psed_1714
methylmalonyl-CoA epimerase (151 aa)
   
 
  0.909
Psed_0938
Cystathionine beta-synthase (456 aa)
   
  0.881
Psed_5351
Inosine-5’-monophosphate dehydrogenase (501 aa)
   
  0.872
Psed_0954
IMP dehydrogenase (483 aa)
   
  0.872
Psed_6601
CBS domain-containing protein (141 aa)
   
  0.842
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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