STRINGSTRING
Psed_1588 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1588" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1588Hypothetical protein (299 aa)    
Predicted Functional Partners:
Psed_1587
long-chain-fatty-acid--CoA ligase (497 aa)
   
   
  0.701
Psed_6145
Transcriptional activator domain-containing protein (1022 aa)
       
 
  0.555
Psed_4257
LuxR family transcriptional regulator (870 aa)
       
 
  0.555
Psed_4256
LuxR family transcriptional regulator (852 aa)
       
 
  0.555
Psed_2969
LuxR family transcriptional regulator (892 aa)
       
 
  0.555
Psed_2278
LuxR family transcriptional regulator (446 aa)
       
 
  0.555
Psed_2276
Transcriptional regulator domain-containing protein (1012 aa)
       
 
  0.555
Psed_0202
LuxR family transcriptional regulator (890 aa)
       
 
  0.555
Psed_1589
Hypothetical protein (259 aa)
              0.555
Psed_1590
formyl-CoA transferase (395 aa)
   
        0.503
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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