STRINGSTRING
Psed_1616 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1616" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1616Hypothetical protein (422 aa)    
Predicted Functional Partners:
Psed_1615
Hypothetical protein (282 aa)
 
     
  0.987
Psed_0535
Hypothetical protein (226 aa)
          0.968
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (526 aa)
              0.921
Psed_1167
Hypothetical protein (426 aa)
 
     
  0.913
Psed_1561
Competence/damage-inducible protein CinA (432 aa)
              0.831
Psed_2327
Cobalamin (vitamin B12) biosynthesis protein CbiM (369 aa)
 
     
  0.782
Psed_3351
Cobalamin (vitamin B12) biosynthesis protein CbiM (239 aa)
 
          0.681
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (347 aa)
         
  0.572
Psed_2544
Glutamine amidotransferase (237 aa)
              0.558
Psed_5075
MIP family channel protein (272 aa)
              0.537
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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