STRINGSTRING
Psed_1619 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1619" - Phosphosulfolactate synthase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1619Phosphosulfolactate synthase (264 aa)    
Predicted Functional Partners:
Psed_1623
Argininosuccinate lyase (501 aa)
 
          0.880
Psed_1622
1-aminocyclopropane-1-carboxylate deaminase (327 aa)
              0.860
Psed_1620
Hypothetical protein (355 aa)
              0.860
Psed_1621
Fumarate lyase (451 aa)
              0.859
Psed_1618
Hypothetical protein (119 aa)
              0.819
Psed_6288
Phosphosulfolactate synthase (261 aa)
   
   
 
0.803
Psed_1617
OsmC family protein (158 aa)
              0.612
Psed_1624
CoA-disulfide reductase (444 aa)
              0.513
Psed_1625
Hypothetical protein (275 aa)
              0.505
Psed_6328
Malate dehydrogenase (387 aa)
 
     
  0.463
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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