STRINGSTRING
Psed_1621 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1621" - Fumarate lyase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1621Fumarate lyase (451 aa)    
Predicted Functional Partners:
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (426 aa)
 
 
  0.991
Psed_1623
Argininosuccinate lyase (501 aa)
   
 
  0.988
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (519 aa)
   
  0.988
Psed_1447
Phosphoribosylaminoimidazolecarboxamide formyltransferase (383 aa)
   
  0.988
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase (283 aa)
   
  0.987
purM
Phosphoribosylformylglycinamidine cyclo-ligase (374 aa)
 
 
  0.974
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (187 aa)
   
  0.964
purD
Phosphoribosylamine--glycine ligase (417 aa)
 
 
  0.952
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (526 aa)
 
   
  0.946
Psed_4554
Adenosine kinase (325 aa)
   
  0.939
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]