STRINGSTRING
Psed_1660 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1660" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1660Hypothetical protein (267 aa)    
Predicted Functional Partners:
Psed_1661
Hypothetical protein (344 aa)
 
          0.971
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (499 aa)
              0.699
argS
arginyl-tRNA synthetase (547 aa)
              0.697
Psed_1664
Homoserine dehydrogenase (456 aa)
              0.461
Psed_1659
AraC family transcriptional regulator (314 aa)
              0.417
Psed_3648
Polyphosphate--glucose phosphotransferase (256 aa)
   
          0.413
Psed_1303
Heavy metal transport/detoxification protein (70 aa)
              0.412
Psed_0565
Heavy metal transport/detoxification protein (73 aa)
              0.412
Psed_6401
Heavy metal translocating P-type ATPase (1039 aa)
         
  0.408
Psed_6160
Heavy metal translocating P-type ATPase (640 aa)
         
  0.408
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]