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rho protein (Pseudonocardia dioxanivorans) - STRING interaction network
"rho" - Transcription termination factor Rho in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (793 aa)    
Predicted Functional Partners:
nusG
NusG antitermination factor; Participates in transcription elongation, termination and antitermination (327 aa)
 
 
  0.932
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.767
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (366 aa)
 
   
  0.762
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (73 aa)
   
   
  0.759
Psed_3872
RNA binding S1 domain-containing protein (487 aa)
 
   
  0.755
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (426 aa)
 
 
 
  0.742
tig
Trigger factor Tig; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (494 aa)
   
 
  0.680
Psed_1665
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine (362 aa)
   
   
  0.655
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate (302 aa)
   
        0.647
Psed_2831
DNA polymerase III subunit alpha (1185 aa)
 
     
  0.634
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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