STRINGSTRING
Psed_1690 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1690" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1690Hypothetical protein (270 aa)    
Predicted Functional Partners:
Psed_1691
methylmalonyl-CoA mutase large subunit (663 aa)
              0.647
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (422 aa)
              0.545
Psed_0287
Hypothetical protein (198 aa)
   
          0.485
Psed_1024
Hypothetical protein (197 aa)
   
          0.466
Psed_0720
Hypothetical protein (223 aa)
   
          0.448
Psed_2318
Regulatory protein MerR (178 aa)
   
          0.444
Psed_5496
MerR family transcriptional regulator (116 aa)
   
          0.433
Psed_4715
Hypothetical protein (212 aa)
   
          0.417
Psed_1688
ATP/cobalamin adenosyltransferase (200 aa)
              0.416
Psed_0842
Hypothetical protein (144 aa)
   
          0.413
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]