STRINGSTRING
Psed_1706 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1706" - LuxR family transcriptional regulator in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1706LuxR family transcriptional regulator (940 aa)    
Predicted Functional Partners:
nucS
Hypothetical protein; Cleaves both 3’ and 5’ ssDNA extremities of branched DNA structures (219 aa)
              0.840
Psed_6282
Winged helix family transcriptional regulator (1070 aa)
 
          0.764
Psed_5542
Winged helix family transcriptional regulator (999 aa)
   
          0.746
Psed_1705
Amidohydrolase (397 aa)
              0.679
Psed_4023
SARP family transcriptional regulator (568 aa)
   
          0.534
Psed_5889
LuxR family transcriptional regulator (899 aa)
 
          0.523
Psed_1708
Alcohol dehydrogenase (355 aa)
              0.516
Psed_6171
Guanylate cyclase (495 aa)
   
   
  0.502
Psed_4886
LuxR family transcriptional regulator (225 aa)
   
          0.441
Psed_1709
Aldehyde dehydrogenase (490 aa)
              0.403
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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