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Psed_1716 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1716" - LAO/AO transport system ATPase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1716LAO/AO transport system ATPase (326 aa)    
Predicted Functional Partners:
Psed_3125
methylmalonyl-CoA mutase large subunit (726 aa)
  0.996
Psed_1691
methylmalonyl-CoA mutase large subunit (663 aa)
  0.996
Psed_3124
methylmalonyl-CoA mutase (640 aa)
 
  0.995
Psed_4409
methylmalonyl-CoA mutase large subunit (1081 aa)
 
0.979
Psed_1714
methylmalonyl-CoA epimerase (151 aa)
   
  0.954
Psed_1715
acetyl-CoA acetyltransferase (396 aa)
         
  0.819
Psed_5261
propionyl-CoA carboxylase (553 aa)
 
     
  0.683
Psed_0517
propionyl-CoA carboxylase (465 aa)
 
     
  0.666
Psed_4005
Carbamoyl-phosphate synthase L chain ATP-binding protein (1086 aa)
         
  0.591
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
     
 
  0.554
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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