STRINGSTRING
Psed_1736 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1736" - Type 11 methyltransferase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1736Type 11 methyltransferase (318 aa)    
Predicted Functional Partners:
Psed_1741
Acetyltransferase (isoleucine patch superfamily)-like protein (257 aa)
 
          0.820
Psed_1735
enoyl-CoA hydratase (269 aa)
              0.796
Psed_2767
Hypothetical protein (193 aa)
   
          0.778
Psed_1755
Type 11 methyltransferase (245 aa)
 
          0.770
Psed_2007
Hypothetical protein (259 aa)
   
          0.751
Psed_0964
Hypothetical protein (216 aa)
   
          0.747
Psed_3053
Hypothetical protein (219 aa)
   
          0.745
Psed_3952
Hypothetical protein (151 aa)
   
          0.742
Psed_0589
Hypothetical protein (266 aa)
   
          0.734
Psed_3059
Hypothetical protein (250 aa)
   
          0.724
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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