STRINGSTRING
Psed_1764 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1764" - PucR family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1764PucR family transcriptional regulator (504 aa)    
Predicted Functional Partners:
Psed_1760
Xanthine dehydrogenase (756 aa)
 
     
  0.838
Psed_1763
Molybdopterin dehydrogenase FAD-binding protein (290 aa)
 
          0.774
Psed_1761
S-adenosylhomocysteine deaminase (444 aa)
              0.666
Psed_1762
Carbon-monoxide dehydrogenase (156 aa)
         
  0.663
Psed_6466
PucR family transcriptional regulator (531 aa)
   
          0.644
Psed_3084
Transcriptional regulator CdaR (569 aa)
   
          0.632
Psed_1759
AIG2 family protein (127 aa)
 
          0.620
Psed_3904
CO dehydrogenase maturation factor-like protein (316 aa)
   
          0.617
Psed_1758
Allantoinase (441 aa)
 
     
  0.602
Psed_3856
Hypothetical protein (343 aa)
   
          0.597
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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