STRINGSTRING
Psed_1777 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1777" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1777Hypothetical protein (297 aa)    
Predicted Functional Partners:
Psed_4661
Hypothetical protein (157 aa)
   
          0.643
mnmA
tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (359 aa)
              0.640
Psed_1775
Cysteine desulfurase (477 aa)
              0.640
Psed_1774
Phospholipid/glycerol acyltransferase (374 aa)
              0.640
Psed_2423
Polyketide cyclase/dehydrase (149 aa)
 
          0.523
Psed_3353
Cobalt ABC transporter inner membrane subunit CbiQ (254 aa)
   
          0.499
Psed_1950
Hypothetical protein (213 aa)
   
          0.492
Psed_1773
Ornithine-acyl(acyl carrier protein) N-acyltransferase (253 aa)
              0.488
Psed_4710
Hypothetical protein (163 aa)
   
          0.468
Psed_0435
Histidine kinase (596 aa)
   
          0.465
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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