STRINGSTRING
Psed_1813 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1813" - Glucose dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1813Glucose dehydrogenase (382 aa)    
Predicted Functional Partners:
Psed_1814
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (307 aa)
              0.662
Psed_0964
Hypothetical protein (216 aa)
   
        0.640
Psed_1507
Hypothetical protein (185 aa)
   
          0.627
Psed_3053
Hypothetical protein (219 aa)
   
          0.615
Psed_2986
Hypothetical protein (106 aa)
   
        0.586
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
         
  0.583
Psed_2767
Hypothetical protein (193 aa)
   
        0.571
Psed_1815
DoxX family protein (198 aa)
              0.558
Psed_5295
Hypothetical protein (440 aa)
   
          0.554
Psed_5259
Hypothetical protein (191 aa)
   
          0.552
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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