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Psed_1827 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1827" - Ethyl tert-butyl ether degradation EthD in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1827Ethyl tert-butyl ether degradation EthD (104 aa)    
Predicted Functional Partners:
Psed_1828
Monooxygenase FAD-binding protein (435 aa)
              0.559
Psed_2703
phenylacetate-CoA oxygenase subunit PaaJ (169 aa)
 
          0.477
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (497 aa)
              0.439
Psed_2696
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) (441 aa)
         
  0.417
Psed_2541
phenylacetate--CoA ligase (453 aa)
         
  0.417
Psed_6274
AMP-dependent synthetase/ligase (494 aa)
              0.412
Psed_5926
AMP-dependent synthetase/ligase (458 aa)
              0.412
Psed_5910
phenylacetate--CoA ligase (461 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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